Index of /download/gff/A_niger_CBS_513_88

Icon  Name                                                                             Last modified      Size  Description
[DIR] Parent Directory                                                                                      -   
[   ] A_niger_CBS_513_88_gaps.gff                                                      17-Aug-2011 15:03   29K  
[TXT] A_niger_CBS_513_88_version_s01-m04-r22_features.gff                              13-May-2012 08:02   14M  
[   ] A_niger_CBS_513_88_version_s01-m04-r22_features_with_chromosome_sequences.gff.gz 13-May-2012 08:02   11M  
[TXT] A_niger_CBS_513_88_version_s01-m04-r22_intergenic.gff                            13-May-2012 09:30  2.8M  
[DIR] archive/                                                                         13-May-2012 09:30    -   

This directory contains the downloadable AspGD files in the Generic
Feature Format (GFF).  These files describe features in AspGD, including 
chromosomes, ORFs, CDSs, introns, sequence gaps, intergenic regions, etc.

Please see http://song.sourceforge.net/gff3.shtml for a detailed description 
of the Generic Feature Format (GFF).

The file
A_niger_CBS_513_88_version_sXX-mYY-rZZ_features.gff contains the
current AspGD annotation of the A. niger genome sequence.
The notation "sXX-mYY-rZZ" in the filename indicates the genome 
version to which the data in the file corresponds. It is based
on the versioning system used for A. nidulans, which is described 
in detail at:
http://www.aspgd.org/help/SequenceHelp.shtml#Anids_versions 

The file 
A_niger_CBS_513_88_version_sXX-mYY-rZZ_features_with_chromosome_sequences.gff.gz 
contains the current AspGD annotation and the current genomic sequence
of all chromosomes of the genome sequence. The AspGD annotations in 
this file and the A_niger_CBS_513_88_version_sXX-mYY-rZZ_features.gff file
above are the same. The chromosome sequences are specified 
in the "##FASTA" section at the end of this file according to GFF3 file format 
specifications (see http://song.sourceforge.net/gff3.shtml). The notation 
"sXX-mYY-rZZ" in the filename indicates the genome 
version to which the data in the file corresponds. This file is updated weekly.

The file
A_niger_CBS_513_88_version_sXX-mYY-rZZ_intergenic.gff 
lists the intergenic regions between 
coding regions in the chromosomes. This file also contains 
lengths of these intergenic sequences and GC and AT content of each 
intergenic region (percent GC and percent AT).
The notation "sXX-mYY-rZZ" in the filename indicates the genome 
version to which the data in the file corresponds.

The file
A_niger_CBS_513_88_gaps.gff